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Quantitative descripton of marine litter at the seafloor of the Baltic Sea

Marine litter at the seafloor comprises different materials. Plastic is the most frequent material of marine litter found at the seafloor of the Baltic Sea (55,6%). "Abandoned, lost, discarded or otherwise lost fishing gear" (ALDFG) is a subgroup of plastic litter with special importance for environmental assessment because it has a defined source and may pose a health risk to animals. With the data provided, marine litter at the seafloor of the Baltic Sea was quantified and characterized with special regard to fishery as source. 72 litter items (LI) were collected within fishery catches by bottom trawling during three cruises in 2020 and 2021. The data were used to quantify litter at the seafloor of the Baltic Sea (9.2 LI/km²) including 2.2 LI/km² ALDFG and 0.4 LI/km² fishery nets. We conclude that fishery is an important source of litter and ALDFG represent a considerable share of marine litter with 22.2%.

Measured environmental concentrations of copper and hazard quotients in the German Bight in summer from 1986 to 2021

Data includes the measured environmental concentrations (MEC) of the summer copper (Cu) concentration in the German Bight from 1986 to 2021 (MUDAB database, https://geoportal.bafg.de/MUDABAnwendung/), including sampling points coordinates, year of sampling and Cu concentration. Additionally the Hazard quotient (HQ) is provided by dividing the MEC with the predicted no effect concentration (PNEC), defined as EC10 estimates from Crassostrea gigas embryos exposed for 48 h at 18°C and LC10 estimates from C. gigas larvae exposed for 24 h at 24°C, divided by an assessment factor (AF) of 5.

Modeled environmental data-layers and changes predicted under RCP2.6, 4.5 and 8.5 for the deep Atlantic Ocean

The data layers provided show current values for seawater temperature, pH, calcite and aragonite saturation (%), oxygen concentration, and particulate organic carbon (POC) flux to the seafloor at different depths (500, 1000, 2000, 3000, and 4000m) at the present day (1951-2000) and changes in these variables expected between 2041-2060 and 2081-2100 under different RCP scenarios. The data layers were generated following the methods described in Levin et al. (2020). In short, in 2019, we obtained the present day and future ocean projections for the different years which were compiled from all available data generated by Earth Systems Models as part of the Coupled Model Inter-comparison Project Phase 5 (CMIP5) to the Fifth Assessment Report of the Intergovernmental Panel on Climate Change. Three Earth System Models, including GFDL‐ESM‐2G, IPSL‐CM5A‐MR, and MPI‐ESM‐MR were collected and multi-model averages of temperature, pH, O2 , export production at 100-m depth (epc100), carbonate ion concentration (co3), and carbonate ion concentration for seawater in equilibrium with aragonite (co3satarg) and calcite (co3satcalc) were calculated. The epc100 was converted to export POC flux at the seafloor using the Martin curve (Martin et al., 1987) following the equation: POC flux = export production*(depth/export depth)0.858. The export depth was set to 100 m, and the water depth using the ETOPO1 Global Relief Model (Amante and Eakins, 2008). Seafloor aragonite and calcite saturation were computed by dividing co3 by co3satarg and co3satcalc. All variableswere reported as the inter-annual mean projections between 1951-2000, 2041-2060, and 2081-2100. The data for calcite and aragonite saturation can be found in Morato et al. (2020).

Mytilus edulis and Magallana gigas growth rates from a three-month mesocosm experiment, Sylt, 2023

This dataset contains individual-level growth rate measurements of the blue mussel Mytilus edulis and the Pacific oyster Magallana gigas, collected during a controlled mesocosm experiment in Sylt, Germany (coordinates are included in the dataset). Data were collected over a three-month period, from 29 March 2023 to 26 June 2023. Twelve mesocosms were used: six maintained at ambient temperature and six maintained at +3 °C above ambient. A randomized experimental design was used: six mesocosms contained only M. edulis, while the remaining six contained both species. Observations include shell length and daily shell-length growth rates, total wet weight (including shell) and daily growth rates based on weight. Each mussel was labeled and categorized by size class. Measurements were obtained using digital calipers (The Noble Finn, Model 150 mm) and laboratory balances (Type 00AC, Sartorius AG Göttingen, Germany), as well as handheld multiparameter instruments for water temperature. The dataset provides reproducible, traceable individual-level responses of M. edulis and M. gigas under controlled warming, supporting studies on physiological responses of coastal bivalves to temperature changes.

Mytilus edulis growth rates from a three-month mesocosm experiment, Sylt, 2022

This dataset contains individual-level measurements of the blue mussel Mytilus edulis collected during a controlled mesocosm experiment at Sylt, Germany. Data were collected over a three-month period from 2 April 2022 to 27 June 2022. The experiment comprised twelve mesocosms, with four maintained at ambient temperature, four maintained at +1.5°C above ambient, and four at +3 °C above ambient. Observations include shell length, shell-length growth rates, and multiple biomass fractions, including total wet weight, wet tissue mass weight, shell-free dry weight, and ash-free dry weight, from which weight-based growth rates were calculated. All measurements were obtained using standard, traceable laboratory and field instruments. The dataset documents individual-level growth responses of M. edulis under controlled warming conditions and provides a reproducible resource for studies on physiological responses of coastal bivalves to temperature changes.

Raw data of physical oceanography during RV HEINCKE cruise HE662

Raw physical oceanography data was acquired by a ship-based Seabird SBE911plus CTD-Rosette system onboard RV HEINCKE . The CTD was equipped with duplicate sensors for temperature (SBE3plus) and conductivity (SBE4) as well as one sensor for oxygen (SBE43). Additional sensors such as a WET Labs C-Star transmissometer, a WET Labs ECO-AFL fluorometer (FLRTD) and an altimeter (Teledyne Benthos PSA-916) were mounted to the CTD. The data was recorded using pre-cruise calibration coefficients. No correction, post-cruise calibration or quality control was applied. Processed profile data are available via the link below.

Methane concentration and diffusive flux in the Northern Sea off Heligoland in 2024

As part of the MOSES Project, in April 2023 methane measurements were started in the north-western part of the island Heligoland in the German Bight (North Sea). The objective was to complement the measurements of the Sternfahrten to identify the carbon cycle and its flow from the start of the Elbe river into the North Sea. Therefore, a Contros methane sensor for dissolved methane was deployed under water at about 10 to 12 meter depth (depending on the tide) close to the underwater observatory (UW-OBS) MarGate (54°11' N, 7°52' E), from the COSYNA Project. To ensure correct values latter was cleaned frequently from growing organisms by scientific divers. The present data contains the data from 2024, the second year running the sensors. Based on the concentrations of dissolved methane the methane emissions (diffusive flux) was calculated.

Continuous recordings of environmental parameters at station 12, Mittelgrund (2022-03 - 2024-09)

Additionally, at four shallow water stations (Booknis Eck, Buelk, Behrensdorf and Katharinenhof) temperature, salinity and dissolved oxygen are continuously logged at 2-3 m depth by self-contained data loggers. These are: (I) MiniDOT loggers (Precision Measurement Engineering; http://pme.com; ±10 µmol L-1 or ±5 % saturation) including copper antifouling option (copper plate and mesh) to measure dissolved oxygen concentration and (II) DST CT salinity & temperature loggers (Star-Oddi; http://star-oddi.com; ±1.5 mS cm-1) to record the conductivity. Both sensor types additionally record water temperature with an accuracy of ± 0.1 °C. The sampling interval was set to 30 minutes for all parameters. In context of the long-term monitoring project RegLocDiv (Regional-Local-Diversity) by M. Wahl (Franz, M. et al. 2019a), another seven stations were equipped with the same two types of sensors at 4-6 m depth to continuously record environmental parameters (again: temperature, salinity, dissolved oxygen) and included into this data set. These stations are at: Falshoeft, Booknis Eck, Schoenberg, Westermarkelsdorf, Staberhuk, Kellenhusen and Salzhaff (abandoned in 2023). Since 2021, in the context of implementing a reef monitoring to fulfil obligations by the EU Habitats Directive, step-by-step, eleven further stations were installed at reefs in the Schleswig-Holstein Baltic Sea. These are at: Platengrund (14 m depth) and Mittelgrund (8 m) (both since 2021), at Walkyriengrund (9 m), Brodtener Ufer (8 m), Außenschlei (11 m), Kalkgrund (8 m), Stollergrund (7.5 m) and Flueggesand (10 m) (all since 2022), as well as at Gabelsflach (10 m), Sagasbank (8.5 m) and Stabehuk (11.5 m) (all since 2023). Again, at all of these 11 stations, temperature, salinity and dissolved oxygen are continuously logged by self-contained data loggers: Conductivity (and temperature) is logged by HOBO® Salt Water Conductivity/Salinity Data Logger (Onset Computer Corporation, Bourne, MA, USA; https://www.onsetcomp.com) using the U2X protective housing to prevent fouling on the sensors. The same MiniDOT loggers (Precision Measurement Engineering) as at the above mentioned more shallow stations (including antifouling copper plate and mesh) are used to measure dissolved oxygen concentration. Dissolved oxygen concentration data measured by the MiniDOT loggers are corrected for a depth of 10 m (or 2,5 m on the shallow stations) using the software provided by the manufacturer. Additionally, a manual compensation for salinity was calculated (see details in Franz, M. et al. 2019b). Quality control was carried out by spike and gradient tests, following recommendations of SeaDataNet quality control procedures (see https://seadatanet.org/Standards/Data-Quality-Control). All data values were flagged according to applied quality checks using the following flags: 1 = Pass, 2 = Suspect, 3 = Fail, 4 = Visually suspect, 5 = Salinity compensation fail (further explanations can be found in Franz, M. et al. 2019b).

Continuous recordings of environmental parameters at station 13, Platengrund (2021-09 - 2024-09)

Additionally, at four shallow water stations (Booknis Eck, Buelk, Behrensdorf and Katharinenhof) temperature, salinity and dissolved oxygen are continuously logged at 2-3 m depth by self-contained data loggers. These are: (I) MiniDOT loggers (Precision Measurement Engineering; http://pme.com; ±10 µmol L-1 or ±5 % saturation) including copper antifouling option (copper plate and mesh) to measure dissolved oxygen concentration and (II) DST CT salinity & temperature loggers (Star-Oddi; http://star-oddi.com; ±1.5 mS cm-1) to record the conductivity. Both sensor types additionally record water temperature with an accuracy of ± 0.1 °C. The sampling interval was set to 30 minutes for all parameters. In context of the long-term monitoring project RegLocDiv (Regional-Local-Diversity) by M. Wahl (Franz, M. et al. 2019a), another seven stations were equipped with the same two types of sensors at 4-6 m depth to continuously record environmental parameters (again: temperature, salinity, dissolved oxygen) and included into this data set. These stations are at: Falshoeft, Booknis Eck, Schoenberg, Westermarkelsdorf, Staberhuk, Kellenhusen and Salzhaff (abandoned in 2023). Since 2021, in the context of implementing a reef monitoring to fulfil obligations by the EU Habitats Directive, step-by-step, eleven further stations were installed at reefs in the Schleswig-Holstein Baltic Sea. These are at: Platengrund (14 m depth) and Mittelgrund (8 m) (both since 2021), at Walkyriengrund (9 m), Brodtener Ufer (8 m), Außenschlei (11 m), Kalkgrund (8 m), Stollergrund (7.5 m) and Flueggesand (10 m) (all since 2022), as well as at Gabelsflach (10 m), Sagasbank (8.5 m) and Stabehuk (11.5 m) (all since 2023). Again, at all of these 11 stations, temperature, salinity and dissolved oxygen are continuously logged by self-contained data loggers: Conductivity (and temperature) is logged by HOBO® Salt Water Conductivity/Salinity Data Logger (Onset Computer Corporation, Bourne, MA, USA; https://www.onsetcomp.com) using the U2X protective housing to prevent fouling on the sensors. The same MiniDOT loggers (Precision Measurement Engineering) as at the above mentioned more shallow stations (including antifouling copper plate and mesh) are used to measure dissolved oxygen concentration. Dissolved oxygen concentration data measured by the MiniDOT loggers are corrected for a depth of 10 m (or 2,5 m on the shallow stations) using the software provided by the manufacturer. Additionally, a manual compensation for salinity was calculated (see details in Franz, M. et al. 2019b). Quality control was carried out by spike and gradient tests, following recommendations of SeaDataNet quality control procedures (see https://seadatanet.org/Standards/Data-Quality-Control). All data values were flagged according to applied quality checks using the following flags: 1 = Pass, 2 = Suspect, 3 = Fail, 4 = Visually suspect, 5 = Salinity compensation fail (further explanations can be found in Franz, M. et al. 2019b).

Continuous recordings of environmental parameters at station 17, Sagasbank (2023-10 - 2024-09)

Additionally, at four shallow water stations (Booknis Eck, Buelk, Behrensdorf and Katharinenhof) temperature, salinity and dissolved oxygen are continuously logged at 2-3 m depth by self-contained data loggers. These are: (I) MiniDOT loggers (Precision Measurement Engineering; http://pme.com; ±10 µmol L-1 or ±5 % saturation) including copper antifouling option (copper plate and mesh) to measure dissolved oxygen concentration and (II) DST CT salinity & temperature loggers (Star-Oddi; http://star-oddi.com; ±1.5 mS cm-1) to record the conductivity. Both sensor types additionally record water temperature with an accuracy of ± 0.1 °C. The sampling interval was set to 30 minutes for all parameters. In context of the long-term monitoring project RegLocDiv (Regional-Local-Diversity) by M. Wahl (Franz, M. et al. 2019a), another seven stations were equipped with the same two types of sensors at 4-6 m depth to continuously record environmental parameters (again: temperature, salinity, dissolved oxygen) and included into this data set. These stations are at: Falshoeft, Booknis Eck, Schoenberg, Westermarkelsdorf, Staberhuk, Kellenhusen and Salzhaff (abandoned in 2023). Since 2021, in the context of implementing a reef monitoring to fulfil obligations by the EU Habitats Directive, step-by-step, eleven further stations were installed at reefs in the Schleswig-Holstein Baltic Sea. These are at: Platengrund (14 m depth) and Mittelgrund (8 m) (both since 2021), at Walkyriengrund (9 m), Brodtener Ufer (8 m), Außenschlei (11 m), Kalkgrund (8 m), Stollergrund (7.5 m) and Flueggesand (10 m) (all since 2022), as well as at Gabelsflach (10 m), Sagasbank (8.5 m) and Stabehuk (11.5 m) (all since 2023). Again, at all of these 11 stations, temperature, salinity and dissolved oxygen are continuously logged by self-contained data loggers: Conductivity (and temperature) is logged by HOBO® Salt Water Conductivity/Salinity Data Logger (Onset Computer Corporation, Bourne, MA, USA; https://www.onsetcomp.com) using the U2X protective housing to prevent fouling on the sensors. The same MiniDOT loggers (Precision Measurement Engineering) as at the above mentioned more shallow stations (including antifouling copper plate and mesh) are used to measure dissolved oxygen concentration. Dissolved oxygen concentration data measured by the MiniDOT loggers are corrected for a depth of 10 m (or 2,5 m on the shallow stations) using the software provided by the manufacturer. Additionally, a manual compensation for salinity was calculated (see details in Franz, M. et al. 2019b). Quality control was carried out by spike and gradient tests, following recommendations of SeaDataNet quality control procedures (see https://seadatanet.org/Standards/Data-Quality-Control). All data values were flagged according to applied quality checks using the following flags: 1 = Pass, 2 = Suspect, 3 = Fail, 4 = Visually suspect, 5 = Salinity compensation fail (further explanations can be found in Franz, M. et al. 2019b).

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