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Carbonate chemistry parameters calculated from measured pH, total alkalinity, salinity and temperature in the alkalization mesocosms of a chronic Ostrea edulis alkalinity-enhancement exposure experiment

This dataset contains calculated carbonate chemistry parameters, including the concentrations of dissolved CO2, HCO3-, CO32- and dissolved inorganic carbon, the fugacity and partial pressure of CO2 and the saturation states of aragonite (Ωarag) and calcite (Ωcalc), for the alkalization mesocosms. Values were calculated from pH, total alkalinity, salinity and temperature measured between 17 April and 19 June 2024, using the seacarb package (Orr et al., 2018) in R (V. 4.3.2). Measured pH values, which refer to the NBS scale, were first converted to the total scale using the total proton activity coefficient fH of Takahashi et al. (1982), lowering pH by 0.12 to 0.13 units across the measured salinity and temperature range. Calculations used the carbonic acid dissociation constants of Lueker et al. (2000), the bisulfate dissociation constant of Dickson (1990), the hydrogen fluoride constant of Perez & Fraga (1987), total boron after Uppström (1974) and the aragonite and calcite solubility products of Mucci (1983), all evaluated at in situ temperature and salinity. The conversion from the NBS to the total scale carries a residual uncertainty of about 0.01 to 0.02 pH units, because the liquid junction potential between the dilute calibration buffers and seawater is not fully captured by fH. This propagates to an uncertainty of roughly 5 to 15 % in calculated pCO2 and a correspondingly smaller uncertainty in the saturation states.

Updated global compilation of coccolithophore calcification measurements from unperturbed water samples including ancillary data

This database expands the Poulton et al., 2018 (doi:10.1594/PANGAEA.888182) database of pelagic calcium carbonate (CP) rate measurements from isotopic tracer uptake in incubated discrete water samples, as discussed in Daniels et al., 2018 (doi:10.5194/essd-10-1859-2018), and accompanies Marsh et al. (in prep.). The database now includes more CP (new data n = 400; complete database n = 3165), net primary production rate (PP) (new data n = 399; complete database n = 3150), total coccolithophore cell counts (new data n = 240; complete database n = 1512), and Emiliania huxleyi cell counts (new data n = 27; complete database n = 612). This expanded database maintains the record of data, including the principal investigator, expedition, OS region, doi reference (where available), collection date and year, sample ID, latitude, longitude, sampling and light depth, and method of measuring CP. We further expand the Poulton et al. (2018) data collection by including ancillary and environmental data, including: optical depth (OD, n = 3165), pHtotal (hereinafter referred to as pHT, n = 398), temperature (n = 1160), salinity (n = 1161), and the concentrations of chlorophyll a (n = 1363), NOx (NO3 or the sum of NO3 + NO2, n = 1161), silicic acid (Si(OH)4, n= 1156), phosphate (PO4, n = 1232), dissolved inorganic carbon (DIC, n = 318), total alkalinity (TA, n = 307), bicarbonate ion concentration (n = 349), and carbonate ion concentration (n = 352). All data was matched to CP, sample bottle identifiers (Niskin bottle numbers), and/or sampling depth values. This global database (81 °N - 64 °S, 132 °E - 174 °W) now covers expeditions and upper ocean measurements (0 - 193 m) from 1989 to 2024. Global in-situ geolocated data spanning time is valuable for modelling, satellite algorithms, and capturing calcium carbonate production in the global ocean. This expanded database, including the environmental, nutrient, chlorophyll a, and carbonate chemistry data, also allows for analysis of factors influencing calcium carbonate production on a global scale. This data amalgamation contributes to understanding the biogeochemistry of the oceans, global carbon cycle, and ocean acidification.

Continuous hyperspectral above-water radiometric data along RV HEINCKE cruise HE681

This data set was recorded by permanently installed above-water radiometry onboard RV HEINCKE. Five TriOS instruments are installed at the top of the foremast: one irradiance sensor (ACC) to measure the incoming solar irradiance as a reference, 2 radiometers (ARC) to measure the incoming sky radiance, 2 radiometers (ARC) to measure the sea-surface leaving radiance. One set of radiometers is pointed to 45° starboard and the other to 45° port. The data were recorded with the MSDA-XE software in 15s interval and transferred via cloud. The data were then reformatted and processed with the community processor HyperCP. Ancillary data was taken from the mastertrack and Insightics DSHIP extraction. Data were processed for coastal conditions using sky/sunglint correction by Zhang et al. (2017), NIR residual correction using Ruddick et al. 2006, and BRDF correction based on IOP-based approach by Lee.

Supporting metadata for multiple oceanographic cruises with RV SONNE (SO254, SO245, SO248) and RV POLARSTERN (PS79), Bermuda Atlantic Time-series Study and Hawaii Ocean Time-series

The data presented here include the metadata (cruise, station number, geographic coordinates, water depth, temperature, salinity and solid-phase extracted dissolved organic carbon concentrations (SPE-DOC)) for multiple oceanographic cruises in the Atlantic, Pacific and Southern oceans (HOTS, BATS, SO254, SO245, SO248, ANT 28-II, ANT 28-IV, and 28-V) between 2009 and 2017. These metadata were used in conjunction with the accompanying dataset to assess the role of deep ocean mixing in the molecular composition of dissolved organic matter was compiled from the CTD bottle data of multiple cruises, some of which are available on PANGAEA at the following links: SO248: https://doi.org/10.1594/PANGAEA.864673, SO245: https://doi.org/10.1594/PANGAEA.890394, SO254: https://doi.org/10.1594/PANGAEA.890453.

Hydrochemistry time series at List Ferry Terminal, Sylt, Germany, in 2020

The Sylt Roads pelagic time series covers physical and hydrochemical parameters in the Sylt–Rømø bight, Wadden Sea, North Sea. Sea surface temperature (SST), salinity, pH, ammonium, nitrite, nitrate, dissolved (in)organic nitrogen (DIN, DON), silicate, soluble reactive phosphorus (SRP), dissolved organic phosphorus (DOP), chlorophyll a and suspended matter concentrations (SPM) are measured twice a week. These parameters are used to identify long-term changes in the Northern Wadden Sea.

Hydrochemistry time series at List Entrance Koenigshafen, Sylt, Germany, in 2021

The Sylt Roads pelagic time series covers physical and hydrochemical parameters in the Sylt–Rømø bight, Wadden Sea, North Sea. Sea surface temperature (SST), salinity, pH, ammonium, nitrite, nitrate, dissolved (in)organic nitrogen (DIN, DON), silicate, soluble reactive phosphorus (SRP), dissolved organic phosphorus (DOP), chlorophyll a and suspended matter concentrations (SPM) are measured twice a week. These parameters are used to identify long-term changes in the Northern Wadden Sea.

Seawater carbonate chemistry and physiological performance parameters of Carcinus maenas under respective incubation conditions

Ocean acidification causes an accumulation of CO2 in marine organisms and leads to shifts in acid-base parameters. Acid-base regulation in gill breathers involves a net increase of internal bicarbonate levels through transmembrane ion exchange with the surrounding water. Successful maintenance of body fluid pH depends on the functional capacity of ion-exchange mechanisms and associated energy budget. For a detailed understanding of the dependence of acid-base regulation on water parameters, we investigated the physiological responses of the shore crab Carcinus maenas to 4 weeks of ocean acidification [OA, P(CO2)w = 1800 µatm], at variable water bicarbonate levels, paralleled by changes in water pH. Cardiovascular performance was determined together with extra-(pHe) and intracellular pH (pHi), oxygen consumption, haemolymph CO2 parameters, and ion composition. High water P(CO2) caused haemolymph P(CO2) to rise, but pHe and pHi remained constant due to increased haemolymph and cellular [HCO3-]. This process was effective even under reduced seawater pH and bicarbonate concentrations. While extracellular cation concentrations increased throughout, anion levels remained constant or decreased. Despite similar levels of haemolymph pH and ion concentrations under OA, metabolic rates, and haemolymph flow were significantly depressed by 40 and 30%, respectively, when OA was combined with reduced seawater [HCO3-] and pH. Our findings suggest an influence of water bicarbonate levels on metabolic rates as well as on correlations between blood flow and pHe. This previously unknown phenomenon should direct attention to pathways of acid-base regulation and their potential feedback on whole-animal energy demand, in relation with changing seawater carbonate parameters.

Surface seawater carbonate chemistry, nutrients and phytoplankton community composition on a transect between North Sea and Arctic Ocean, 2008

This data was collected during the 'ICE CHASER' cruise from the southern North Sea to the Arctic (Svalbard) in July-Aug 2008. This data consists of coccolithophore abundance, calcification and primary production rates, carbonate chemistry parameters and ancillary data of macronutrients, chlorophyll-a, average mixed layer irradiance, daily irradiance above the sea surface, euphotic and mixed layer depth, temperature and salinity.

OHGDGT global surface sediment data

Here, we compile an extensive global surface sediment dataset of OH-isoGDGTs as well as regular isoprenoid GDGTs (isoGDGTs), with both data generated at NIOZ and previously published data from other laboratories. We explore recently developed temperature proxies based on hydroxylated isoprenoid Glycerol Dialkyl Glycerol Tetraethers (OH-isoGDGTs), such as %OH, RI-OH, RI-OH' and OHC for their potential for reconstructing past temperature changes. The data contains surface sediment data from the global ocean used in the study 'Evaluating isoprenoidal hydroxylated GDGT-based temperature proxies in surface sediments from the global ocean'. The excel sheet contains information regarding the surface sediments, their location, enivironmental parameters from each location extracted from WOA database, peak area of iso-GDGTs and OH-isoGDGTs, proxy indices discussed in the study and references for previously published data.

Temperature and heating-induced temperature difference measurements from SIMBA-type sea ice mass balance buoy 2022T97

Temperature and heating-induced temperature difference profiles were measured through the atmosphere, sea ice, and ocean using a SIMBA-type sea ice mass balance buoy equipped with a several meter long thermistor chain. The present dataset was recorded by SIMBA 2022T97 (original name NPOL_0803) installed on drifting sea ice in the Arctic Ocean during the expedition Kronprins Haakon AO22 in 2022. Data is available between 2022-08-06 10:38:00 and 2022-11-22 03:02:00. The thermistor chain was Variable 5 m long and included 241 sensors with a regular spacing of 2 cm. The resulting time series includes the evolution of temperature and temperature differences at 30 s and 120 s during a heating cycle of 120 s as a function of location, depth and time. The sampling intervals were usually between hourly and daily, but were most frequently configured to 6 hours for temperature, and 24 hours for temperature differences. In addition to temperatures and geographic location, barometric pressure, ~1 m air temperature, instrument tilt, and compass heading were measured. The present dataset was processed as follows: obvious inconsistencies (missing values) and unrealistic values of GPS position have been removed. This instrument was deployed as part of the project Arctic Passion.

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